BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB005D10SP1|AL425371
(978 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1447 1863 0.0
>3x_Contig1447
Length = 7802
Score = 1863 bits (937), Expect = 0.0
Identities = 960/967 (99%), Gaps = 2/967 (0%)
Strand = Plus / Plus
Query: 1 gatccatcgagatttaaaaccaagtaatttgttgttaaacagcaactgcgatttgaaaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5837 gatccatcgagatttaaaaccaagtaatttgttgttaaacagcaactgcgatttgaaaat 5896
Query: 61 ctgtgattttggtttggcaagaattgtatctgaaagagcaacagatggcgatgcccatgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5897 ctgtgattttggtttggcaagaattgtatctgaaagagcaacagatggcgatgcccatgt 5956
Query: 121 tgacgctgatgacacggatgataactccccttcatcggcggctaatgacggtgacccggc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5957 tgacgctgatgacacggatgataactccccttcatcggcggctaatgacggtgacccggc 6016
Query: 181 aatttcgggaatgacagagtatgtggcaacccgatggtaccgagcaccggaagtaatgtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6017 aatttcgggaatgacagagtatgtggcaacccgatggtaccgagcaccggaagtaatgtt 6076
Query: 241 aacagctgcmcagtactccaagtccatggacgtatggtcatgcggatgcattcttgccga 300
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6077 aacagctgcacagtactccaagtccatggacgtatggtcatgcggatgcattcttgccga 6136
Query: 301 gctcttggggaaacaaccgttgttccccgggaaagattacagagatcagttgatcctgat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6137 gctcttggggaaacaaccgttgttccccgggaaagattacagagatcagttgatcctgat 6196
Query: 361 atttcagactttagggacacccacggaacaagaattggtggagctagtagaaaatagacg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6197 atttcagactttagggacacccacggaacaagaattggtggagctagtagaaaatagacg 6256
Query: 421 tgcacgtgagtccattcgctcgttacctaagcatcccaagatcaattggcggcgtaggtt 480
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6257 tgcacgtgagtacattcgctcgttacctaagcatcccaagatcaattggcggcgtaggtt 6316
Query: 481 cccgaatgcatctgcagccgcccttgatctccttgaccggatgctgcmattcgatccgag 540
||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||
Sbjct: 6317 cccgaatgcatctgcagccgctcttgatctccttgaccggatgctgcaattcgatccgag 6376
Query: 541 gctacggatcactgccacggaagcgctatcacatccatacttggtctcgtaccatgaccc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6377 gctacggatcactgccacggaagcgctatcacatccatacttggtctcgtaccatgaccc 6436
Query: 601 ggacgacgagcccgaa-gaactccgattccttcgtcattctttcaatttgaccaatggaa 659
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6437 ggacgacgagcccgaaggaactccgattccttcgtcattctttcaatttgaccaatggaa 6496
Query: 660 gtcgcggctaaatacaaaggatttgaagcggctgttatggaacgaaatcgtgtcatgaga 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6497 gtcgcggctaaatacaaaggatttgaagcggctgttatggaacgaaatcgtgtcatgaga 6556
Query: 720 cacaccatccaaaaacaaacgaatgactaagtwaccactagcgtattatatcattttctt 779
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 6557 cacaccatccaaaaacaaacgaatgactaagtaaccactagcgtattatatcattttctt 6616
Query: 780 gtgtagaggtctccaaaatgaacaaagaacaccatcagataaacataatgcggttttgtg 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6617 gtgtagaggtctccaaaatgaacaaagaacaccatcagataaacataatgcggttttgtg 6676
Query: 840 ctttggaaaggaaaaaaagaaattgagacgaaaagatcccatttcggagccgccgttctg 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6677 ctttggaaaggaaaaaaagaaattgagacgaaaagatcccatttcggagccgccgttctg 6736
Query: 900 cgattatcttaaatgcgattttttcttgtttgttttagggg-cccctcgttgcagggaag 958
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 6737 cgattatcttaaatgcgattttttcttgtttgttttaggggccccctcgttgcagggaag 6796
Query: 959 gtcaaac 965
|||||||
Sbjct: 6797 gtcaaac 6803
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6570
Number of Sequences: 1807
Number of extensions: 6570
Number of successful extensions: 48
Number of sequences better than 1.0e-20: 1
length of query: 978
length of database: 10,358,551
effective HSP length: 16
effective length of query: 962
effective length of database: 10,329,639
effective search space: 9937112718
effective search space used: 9937112718
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)